publications-volff

This folder holds the following references to publications, sorted by year and author.

There are 115 references in this bibliography folder.

Chalopin, D, Volff, JN, Galiana, D, Anderson, JL, and Schartl, M (2015).
Transposable elements and early evolution of sex chromosomes in fish
Chromosome Res, 23(3):545-60.

Henriet, S, Sumic, S, Doufoundou-Guilengui, C, Jensen, MF, Grandmougin, C, Fal, K, Thompson, E, Volff, JN, and Chourrout, D (2015).
Embryonic expression of endogenous retroviral RNAs in somatic tissues adjacent to the Oikopleura germline
Nucleic Acids Res, 43(7):3701-11.

Naville, M, Chalopin, D, Casane, D, Laurenti, P, and Volff, JN (2015).
The coelacanth: Can a "living fossil" have active transposable elements in its genome?
Mob Genet Elements, 5(4):55-59.

Perot, P, Mullins, CS, Naville, M, Bressan, C, Huhns, M, Gock, M, Kuhn, F, Volff, JN, Trillet-Lenoir, V, Linnebacher, M, and Mallet, F (2015).
Expression of young HERV-H loci in the course of colorectal carcinoma and correlation with molecular subtypes
Oncotarget, 6(37):40095-111.

Regneri, J, Volff, JN, and Schartl, M (2015).
Transcriptional control analyses of the Xiphophorus melanoma oncogene
Comp Biochem Physiol C Toxicol Pharmacol, 178:116-27.

Reichwald, K, Petzold, A, Koch, P, Downie, BR, Hartmann, N, Pietsch, S, Baumgart, M, Chalopin, D, Felder, M, Bens, M, Sahm, A, Szafranski, K, Taudien, S, Groth, M, Arisi, I, Weise, A, Bhatt, SS, Sharma, V, Kraus, JM, Schmid, F, Priebe, S, Liehr, T, Gorlach, M, Than, ME, Hiller, M, Kestler, HA, Volff, JN, Schartl, M, Cellerino, A, Englert, C, and Platzer, M (2015).
Insights into Sex Chromosome Evolution and Aging from the Genome of a Short-Lived Fish
Cell, 163(6):1527-38.

Warren, IA, Naville, M, Chalopin, D, Levin, P, Berger, CS, Galiana, D, and Volff, JN (2015).
Evolutionary impact of transposable elements on genomic diversity and lineage-specific innovation in vertebrates
Chromosome Res, 23(3):505-31.

McGaugh, SE, Gross, JB, Aken, B, Blin, M, Borowsky, R, Chalopin, D, Hinaux, H, Jeffery, WR, Keene, A, Ma, L, Minx, P, Murphy, D, O'Quin, KE, Retaux, S, Rohner, N, Searle, SM, Stahl, BA, Tabin, C, Volff, JN, Yoshizawa, M, and Warren, WC (2014).
The cavefish genome reveals candidate genes for eye loss
Nat Commun, 5:5307.

Naville, M, Chalopin, D, and Volff, JN (2014).
Interspecies insertion polymorphism analysis reveals recent activity of transposable elements in extant coelacanths
PLoS One, 9(12):e114382.

Valdivia, K, Jouanno, E, Volff, JN, Galiana-Arnoux, D, Guyomard, R, Helary, L, Mourot, B, Fostier, A, Quillet, E, and Guiguen, Y (2014).
High temperature increases the masculinization rate of the all-female (XX) rainbow trout "Mal" population
PLoS One, 9(12):e113355.

Baillet, A, Le Bouffant, R, Volff, JN, Luangpraseuth, A, Poumerol, E, Thepot, D, Pailhoux, E, Livera, G, Cotinot, C, and Mandon-Pepin, B (2011).
TOPAZ1, a novel germ cell-specific expressed gene conserved during evolution across vertebrates
PLoS One, 6(11):e26950.

Bohne, A, Darras, A, D'Cotta, H, Baroiller, JF, Galiana-Arnoux, D, and Volff, JN (2010).
The vertebrate makorin ubiquitin ligase gene family has been shaped by large-scale duplication and retroposition from an ancestral gonad-specific, maternal-effect gene
BMC Genomics, 11:721.

Denoeud, F, Henriet, S, Mungpakdee, S, Aury, JM, Da Silva, C, Brinkmann, H, Mikhaleva, J, Olsen, LC, Jubin, C, Canestro, C, Bouquet, JM, Danks, G, Poulain, J, Campsteijn, C, Adamski, M, Cross, I, Yadetie, F, Muffato, M, Louis, A, Butcher, S, Tsagkogeorga, G, Konrad, A, Singh, S, Jensen, MF, Huynh Cong, E, Eikeseth-Otteraa, H, Noel, B, Anthouard, V, Porcel, BM, Kachouri-Lafond, R, Nishino, A, Ugolini, M, Chourrout, P, Nishida, H, Aasland, R, Huzurbazar, S, Westhof, E, Delsuc, F, Lehrach, H, Reinhardt, R, Weissenbach, J, Roy, SW, Artiguenave, F, Postlethwait, JH, Manak, JR, Thompson, EM, Jaillon, O, Du Pasquier, L, Boudinot, P, Liberles, DA, Volff, JN, Philippe, H, Lenhard, B, Roest Crollius, H, Wincker, P, and Chourrout, D (2010).
Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate
Science, 330(6009):1381-5.

Volff, JN (2010).
Tame affairs: domesticated transposase and domestic pigs
EMBO Rep, 11(4):241-2.

Bohne, A, Schultheis, C, Galiana-Arnoux, D, Froschauer, A, Zhou, Q, Schmidt, C, Selz, Y, Ozouf-Costaz, C, Dettai, A, Segurens, B, Couloux, A, Bernard-Samain, S, Barbe, V, Chilmonczyk, S, Brunet, F, Darras, A, Tomaszkiewicz, M, Semon, M, Schartl, M, and Volff, JN (2009).
Molecular analysis of the sex chromosomes of the platyfish Xiphophorus maculatus: Towards the identification of a new type of master sexual regulator in vertebrates
Integr Zool, 4(3):277-84.

Chittka, A, Volff, JN, and Wizenmann, A (2009).
Identification of genes differentially expressed in dorsal and ventral chick midbrain during early Development
Bmc Developmental Biology, 9.

Schultheis, C, Bohne, A, Schartl, M, Volff, JN, and Galiana-Arnoux, D (2009).
Sex Determination Diversity and Sex Chromosome Evolution in Poeciliid Fish
Sexual Development, 3(2-3):68-77.

Volff, JN (2009).
Cellular genes derived from Gypsy/Ty3 retrotransposons in mammalian genomes
Ann N Y Acad Sci, 1178:233-43.

Bohne, A, Brunet, F, Galiana-Arnoux, D, Schultheis, C, and Volff, JN (2008).
Transposable elements as drivers of genomic and biological diversity in vertebrates
Chromosome Res, 16(1):203-15.

Braasch, I, Volff, JN, and Schartl, M (2008).
The evolution of teleost pigmentation and the fish-specific genome duplication
Journal of Fish Biology, 73(8):1891-1918.

Baier, A, Alsheimer, M, Volff, JN, and Benavente, R (2007).
Synaptonemal complex protein SYCP3 of the rat: Evolutionarily conserved domains and the assembly of higher order structures
Sexual Development, 1(3):161-168.

Braasch, I, Schartl, M, and Volff, JN (2007).
Evolution of pigment synthesis pathways by gene and genome duplication in fish
BMC Evol Biol, 7:74.

Li, N, Volff, JN, and Wizenmann, A (2007).
Rab23 GTPase is expressed asymmetrically in Hensen's node and plays a role in the dorsoventral patterning of the chick neural tube
Dev Dyn, 236(11):2993-3006.

Selz, Y, Braasch, I, Hoffmann, C, Schmidt, C, Schultheis, C, Schartl, M, and Volff, JN (2007).
Evolution of melanocortin receptors in teleost fish: the melanocortin type 1 receptor
Gene, 401(1-2):114-22.

Volff, JN and Brosius, J (2007).
Modern genomes with retro-look: retrotransposed elements, retroposition and the origin of new genes
Genome Dyn, 3:175-90.