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Bibliography

References to publications, sorted by year and author.

Moretti, C, Stevant, I, and Ghavi-Helm, Y (2019).
3D genome organisation in Drosophila
Briefings in Functional Genomics.

Nauroy, P, Guiraud, A, Chlasta, J, Malbouyres, M, Gillet, B, Hughes, S, Lambert, E, and Ruggiero, F (2019).
Gene profile of zebrafish fin regeneration offers clues to kinetics, organization and biomechanics of basement membrane
Matrix Biol, 75-76:82–101.

Naville, M, Henriet, S, Warren, I, Sumic, S, Reeve, M, Volff, J, and Chourrout, D (2019).
Massive Changes of Genome Size Driven by Expansions of Non-autonomous Transposable Elements
Current Biology, 29(7):1161-1168.e6.

Ray, S, Rosenberg, MI, Chanut-Delalande, H, Decaras, A, Schwertner, B, Toubiana, W, Auman, T, Schnellhammer, I, Teuscher, M, Valenti, P, Khila, A, Klingler, M, and Payre, F (2019).
The mlpt/Ubr3/Svb module comprises an ancient developmental switch for embryonic patterning
Elife, 8.

Romero-Pozuelo, J, Foronda, D, Martin, P, Hudry, B, Merabet, S, Graba, Y, and Sanchez-Herrero, E (2019).
Cooperation of axial and sex specific information controls Drosophila female genitalia growth by regulating the Decapentaplegic pathway
Dev Biol.

Salis, P, Lorin, T, Lewis, V, Rey, C, Marcionetti, A, Escande, ML, Roux, N, Besseau, L, Salamin, N, Semon, M, Parichy, D, Volff, JN, and Laudet, V (2019).
Developmental and comparative transcriptomic identification of iridophore contribution to white barring in clownfish
Pigment Cell Melanoma Res.

Sinigaglia, C and Averof, M (2019).
The multifaceted role of nerves in animal regeneration
Current Opinion in Genetics & Development, 57:98-105.

Tonelotto, V, Trapani, V, Bretaud, S, Heumüller, SE, Wagener, R, Ruggiero, F, and Bonaldo, P (2019).
Spatio-temporal expression and distribution of collagen VI during zebrafish development
Sci Rep, 9(1):19851.

Vargas-Lowman, A, Armisen, D, Floriano, CFB, da Rocha Silva Cordeiro, I, Viala, S, Bouchet, M, Bernard, M, Le Bouquin, A, Santos, ME, Berlioz-Barbier, A, Salvador, A, Figueiredo Moreira, FF, Bonneton, F, and Khila, A (2019).
Cooption of the pteridine biosynthesis pathway underlies the diversification of embryonic colors in water striders
Proceedings of the National Academy of Sciences.

Weigert, M, Schmidt, U, Haase, R, Sugawara, K, and Myers, G (2019).
Star-convex Polyhedra for 3D Object Detection and Segmentation in Microscopy
Miscellaneous publication.

é, H, Billoud, B, Tesson, B, Le Panse, S, Rolland, �, and Charrier, B (2019).
The brown algal mode of tip growth: Keeping stress under control
PLoS Biol, 17(1):e2005258.

é, H, Torode, TA, Tesson, B, Le Bail, A, Billoud, B, Rolland, E, Le Panse, S, Jam, M, and Charrier, B (2019).
Alginates along the filament of the brown alga Ectocarpus help cells cope with stress
Sci Rep, 9(1):12956.

Armisen, D, Rajakumar, R, Friedrich, M, Benoit, JB, Robertson, HM, Panfilio, KA, Ahn, SJ, Poelchau, MF, Chao, H, Dinh, H, Doddapaneni, HV, Dugan, S, Gibbs, RA, Hughes, DST, Han, Y, Lee, SL, Murali, SC, Muzny, DM, Qu, J, Worley, KC, Munoz-Torres, M, Abouheif, E, Bonneton, F, Chen, T, Chiang, LM, Childers, CP, Cridge, AG, Crumiere, AJJ, Decaras, A, Didion, EM, Duncan, EJ, Elpidina, EN, Fave, MJ, Finet, C, Jacobs, CGC, Cheatle Jarvela, AM, Jennings, EC, Jones, JW, Lesoway, MP, Lovegrove, MR, Martynov, A, Oppert, B, Lillico-Ouachour, A, Rajakumar, A, Refki, PN, Rosendale, AJ, Santos, ME, Toubiana, W, van der Zee, M, Vargas Jentzsch, IM, Lowman, AV, Viala, S, Richards, S, and Khila, A (2018).
The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water
BMC Genomics, 19(1):832.

Au Guan, W, Au Venkatasubramanian, L, Au Baek, M, Au Mann, RS, and Au Enriquez, J (2018).
Visualize Drosophila Leg Motor Neuron Axons Through the Adult Cuticle
JoVE(140):e58365.

Bischof, J, Duffraisse, M, Furger, E, Ajuria, L, Giraud, G, Vanderperre, S, Paul, R, Björklund, M, Ahr, D, Ahmed, AW, Spinelli, L, Brun, C, Basler, K, and Merabet, S (2018).
Generation of a versatile BiFC ORFeome library for analyzing protein-protein interactions in live Drosophila
eLife, 7:e38853.

Bretaud, S, Nauroy, P, Malbouyres, M, and Ruggiero, F (2018).
Fishing for collagen function: About development, regeneration and disease
Seminars in Cell & Developmental Biology.

Brosse, M, Bucher, H, Baud, A, Frisk, �M, Goudemand, N, Hagdorn, H, Nützel, A, Ware, D, and Hautmann, M (2018).
New data from Oman indicate benthic high biomass productivity coupled with low taxonomic diversity in the aftermath of the Permian–Triassic Boundary mass extinction
Lethaia, 0(0).

Brunet, FG, Audit, B, Drillon, G, Argoul, F, Volff, JN, and Arneodo, A (2018).
Evidence for DNA Sequence Encoding of an Accessible Nucleosomal Array across Vertebrates
Biophys J, 114(10):2308-2316.

Crumiere, A and Khila, A (2018).
Hox genes mediate the escalation of sexually antagonistic traits in water striders
Unpublished.

Da Motta, FS, Moreira, FFF, CrumiÈRe, AJJ, Santos, ME, and Khila, A (2018).
A new species of Rhagovelia Mayr, 1865 (Hemiptera: Heteroptera: Veliidae) from French Guiana, with new records of Gerromorpha from the country
Zootaxa, 4433(3):520.

Dard, A, Reboulet, J, Jia, Y, Bleicher, F, Duffraisse, M, Vanaker, JM, Forcet, C, and Merabet, S (2018).
Human HOX Proteins Use Diverse and Context-Dependent Motifs to Interact with TALE Class Cofactors
Cell Rep, 22(11):3058-3071.

Doguzhaeva, L, Brayard, A, Goudemand, N, Krumenacker, L, Jenk, J, Bylund, K, Fara, E, Olivier, Nx, Escarguel, G, and Vennin, E (2018).
An Early Triassic gladius associated with soft tissue remains from Idaho, USA—a squid-like coleoid cephalopod at the onset of Mesozoic Era
Acta Palaeontologica Polonica, 63.

Enriquez, J, Rio, LQ, Blazeski, R, Bellemin, S, Godement, P, Mason, C, and Mann, RS (2018).
Differing Strategies Despite Shared Lineages of Motor Neurons and Glia to Achieve Robust Development of an Adult Neuropil in Drosophila
Neuron, 97(3):538–554.

Finet, C, Decaras, A, Armisen, D, and Khila, A (2018).
Data from: The achaete-scute complex contains a single gene that controls bristle development in the semi-aquatic bugs
Miscellaneous publication.

Finet, C, Decaras, A, Armisen, D, and Khila, A (2018).
The achaete-scute complex contains a single gene that controls bristle development in the semi-aquatic bugs
Proc Biol Sci, 285(1892).