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Bibliography

References to publications, sorted by year and author.

Holzer, G, Morishita, Y, Fini, JB, Lorin, T, Gillet, B, Hughes, S, Tohme, M, Deleage, G, Demeneix, B, Arvan, P, and Laudet, V (2016).
Thyroglobulin Represents a Novel Molecular Architecture of Vertebrates
J Biol Chem, 291(32):16553-66.

Kao, D, Lai, AG, Stamataki, E, Rosic, S, Konstantinides, N, Jarvis, E, Di Donfrancesco, A, Pouchkina-Stancheva, N, Semon, M, Grillo, M, Bruce, H, Kumar, S, Siwanowicz, I, Le, A, Lemire, A, Eisen, MB, Extavour, C, Browne, WE, Wolff, C, Averof, M, Patel, NH, Sarkies, P, Pavlopoulos, A, and Aboobaker, A (2016).
The genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestion.
Elife, 5.

Lepetit, D, Gillet, B, Hughes, S, Kraaijeveld, K, and Varaldi, J (2016).
Genome Sequencing of the Behavior Manipulating Virus LbFV Reveals a Possible New Virus Family
Genome Biol Evol, 8(12):3718-3739.

Li, L, Bonneton, F, Tohme, M, Bernard, L, Chen, XY, and Laudet, V (2016).
In Vivo Screening Using Transgenic Zebrafish Embryos Reveals New Effects of HDAC Inhibitors Trichostatin A and Valproic Acid on Organogenesis
PLoS One, 11(2):e0149497.

Markossian, S and Flamant, F (2016).
CRISPR/Cas9: a breakthrough in generating mouse models for endocrinologists
J Mol Endocrinol, 57(2):R81-92.

Martino, ME, Bayjanov, JR, Caffrey, BE, Wels, M, Joncour, P, Hughes, S, Gillet, B, Kleerebezem, M, van Hijum, SA, and Leulier, F (2016).
Nomadic lifestyle of Lactobacillus plantarum revealed by comparative genomics of 54 strains isolated from different habitats
Environ Microbiol, 18(12):4974-4989.

Merabet, S and Mann, RS (2016).
To Be Specific or Not: The Critical Relationship Between Hox And TALE Proteins
Trends Genet, 32(6):334-47.

Naville, M and Volff, JN (2016).
Endogenous Retroviruses in Fish Genomes: From Relics of Past Infections to Evolutionary Innovations?
Front Microbiol, 7:1197.

Naville, M, Warren, IA, Haftek-Terreau, Z, Chalopin, D, Brunet, F, Levin, P, Galiana, D, and Volff, JN (2016).
Not so bad after all: retroviruses and long terminal repeat retrotransposons as a source of new genes in vertebrates
Clin Microbiol Infect, 22(4):312-323.

Richard, S, Aguilera, N, Thevenet, M, Dkhissi-Benyahya, O, and Flamant, F (2016).
Neuronal expression of a thyroid hormone receptor alpha mutation alters mouse behaviour
Behav Brain Res, 321:18-27.

Roulland, Y, Ouararhni, K, Naidenov, M, Ramos, L, Shuaib, M, Syed, SH, Lone, IN, Boopathi, R, Fontaine, E, Papai, G, Tachiwana, H, Gautier, T, Skoufias, D, Padmanabhan, K, Bednar, J, Kurumizaka, H, Schultz, P, Angelov, D, Hamiche, A, and Dimitrov, S (2016).
The Flexible Ends of CENP-A Nucleosome Are Required for Mitotic Fidelity
Mol Cell, 63(4):674-85.

Schwarzer, M, Makki, K, Storelli, G, Machuca-Gayet, I, Srutkova, D, Hermanova, P, Martino, ME, Balmand, S, Hudcovic, T, Heddi, A, Rieusset, J, Kozakova, H, Vidal, H, and Leulier, F (2016).
Lactobacillus plantarum strain maintains growth of infant mice during chronic undernutrition
Science, 351(6275):854-7.

Seyres, D, Ghavi-Helm, Y, Junion, G, Taghli-Lamallem, O, Guichard, C, Roder, L, Girardot, C, Furlong, EEM, and Perrin, L (2016).
Identification and in silico modeling of enhancers reveals new features of the cardiac differentiation network.
Development, 143(23):4533-4542.

Shen, Y, Chalopin, D, Garcia, T, Boswell, M, Boswell, W, Shiryev, SA, Agarwala, R, Volff, JN, Postlethwait, JH, Schartl, M, Minx, P, Warren, WC, and Walter, RB (2016).
X. couchianus and X. hellerii genome models provide genomic variation insight among Xiphophorus species
BMC Genomics, 17:37.

Storelli, G and Leulier, F (2016).
[Juvenile growth, chronic undernutrition and microbiota: the growth-promoting effect of specific Lactobacilli strains is conserved from fruit flies to mice]
Med Sci (Paris), 32(11):925-929.

Strigini, M and Leulier, F (2016).
The role of the microbial environment in Drosophila post-embryonic development
Dev Comp Immunol, 64:39-52.

Toubiana, W and Khila, A (2016).
The benefits of expanding studies of trait exaggeration to hemimetabolous insects and beyond morphology
Curr Opin Genet Dev, 39:14-20.

Tribollet, V, Barenton, B, Kroiss, A, Vincent, S, Zhang, L, Forcet, C, Cerutti, C, Perian, S, Allioli, N, Samarut, J, and Vanacker, JM (2016).
miR-135a Inhibits the Invasion of Cancer Cells via Suppression of ERRalpha
PLoS One, 11(5):e0156445.

Urdy, S, Goudemand, N, and Pantalacci, S (2016).
Looking Beyond the Genes: The Interplay Between Signaling Pathways and Mechanics in the Shaping and Diversification of Epithelial Tissues
Curr Top Dev Biol, 119:227-90.

Zhang, L, Wong, J, and Vanacker, JM (2016).
The estrogen-related receptors (ERRs): potential targets against bone loss
Cell Mol Life Sci, 73(20):3781-7.

Aguilaniu, H (2015).
The mysterious relationship between reproduction and longevity
Worm, 4(2):e1020276.

Allard, L, Demoncheaux, N, Machuca-Gayet, I, Georgess, D, Coury-Lucas, F, Jurdic, P, and Bacchetta, J (2015).
Biphasic Effects of Vitamin D and FGF23 on Human Osteoclast Biology
Calcif Tissue Int, 97(1):69-79.

Andreani, NA, Carraro, L, Martino, ME, Fondi, M, Fasolato, L, Miotto, G, Magro, M, Vianello, F, and Cardazzo, B (2015).
A genomic and transcriptomic approach to investigate the blue pigment phenotype in Pseudomonas fluorescens
Int J Food Microbiol, 213:88-98.

Armisen, D, Refki, PN, Crumiere, AJ, Viala, S, Toubiana, W, and Khila, A (2015).
Predator strike shapes antipredator phenotype through new genetic interactions in water striders
Nat Commun, 6:8153.

Baeza, M, Viala, S, Heim, M, Dard, A, Hudry, B, Duffraisse, M, Rogulja-Ortmann, A, Brun, C, and Merabet, S (2015).
Inhibitory activities of short linear motifs underlie Hox interactome specificity in vivo
Elife, 4.