Publications

This folder holds the following references to publications, sorted by year and author.

There are 38 references in this bibliography folder.

Joly, A, Rebiffé, L, Dusabyinema, Y, Dellinger, J, Leulier, F, and De Vadder, F (2024).
Semaglutide interferes with postnatal growth in a diet-dependent manner
bioRxiv.

Joly, A, Rebiffé, L, Dusabyinema, Y, Dellinger, J, Leulier, F, and De Vadder, F (2024).
Semaglutide interferes with postnatal growth in a diet-dependent manner
Unpublished.

Montanari, M, Manière, G, Berthelot-Grosjean, M, Dusabyinema, Y, Gillet, B, Grosjean, Y, Kurz, CL, and Royet, J (2024).
Larval microbiota primes the Drosophila adult gustatory response
Nat. Commun., 15(1):1341.

Nemoz-Billet, L, Balland, M, Gilquin, L, Gillet, B, vant, I, Guillon, E, Hughes, S, Carpentier, G, Vaganay, E, Sohm, F, Misiak, V, Gonzalez-Melo, MJ, Koch, M, Ghavi-Helm, Y, Bretaud, S, and Ruggiero, F (2024).
Dual topologies of myotomal collagen XV and Tenascin C act in concert to guide and shape developing motor axons
Proc Natl Acad Sci U S A, 121(13):e2314588121.

Rebollo, R, Gerenton, P, Cumunel, E, Mary, A, Sabot, F, Burlet, N, Gillet, B, Hughes, S, S. Oliveira, D, Goubert, C, Fablet, M, Vieira, C, and Lacroix, V (2024).
Identification and quantification of transposable element transcripts using Long-Read RNA-seq in Drosophila germline tissues
Peer Community J., 4(e89).

Cherrad, S, Gillet, B, Dellinger, J, Bellaton, L, Roux, P, Hernandez, C, Steva, H, Perrier, L, Vacher, S, and Hughes, S (2023).
New insights from short and long reads sequencing to explore cytochrome b variants in Plasmopara viticola populations collected from vineyards and related to resistance to complex III inhibitors
PLoS One, 18(1):e0268385.

Ferrarini, MG, Vallier, A, Vincent-Monégat, C, Dell'Aglio, E, Gillet, B, Hughes, S, Hurtado, O, Condemine, G, Zaidman-Rémy, A, Rebollo, R, Parisot, N, and Heddi, A (2023).
Coordination of host and endosymbiont gene expression governs endosymbiont growth and elimination in the cereal weevil Sitophilus spp
Microbiome, 11(1):274.

Grenier, T, Consuegra, J, Ferrarini, MG, Akherraz, H, Bai, L, Dusabyinema, Y, Rahioui, I, Da Silva, P, Gillet, B, Hughes, S, Ramos, CI, Matos, RC, and Leulier, F (2023).
Intestinal GCN2 controls Drosophila systemic growth in response to Lactiplantibacillus plantarum symbiotic cues encoded by r/tRNA operons
Elife, 12.

Jia, Y, Reboulet, J, Gillet, B, Hughes, S, Forcet, C, Tribollet, V, Hajj Sleiman, N, Kundlacz, C, Vanacker, JM, Bleicher, F, and Merabet, S (2023).
A live cell protein complementation assay for ORFeome-wide probing of human HOX interactomes
Cells, 12(1):200.

Mauroux, A, Joncour, P, Brassard-Jollive, N, Bacar, H, Gillet, B, Hughes, S, Ardidie-Robouant, C, Marchand, L, Liabotis, A, Mailly, P, Monnot, C, Germain, S, Bordes, S, Closs, B, Ruggiero, F, and Muller, L (2023).
Papillary and reticular fibroblasts generate distinct microenvironments that differentially impact angiogenesis
Acta Biomater., 168:210–222.

Nedachi, T, Bonod, C, Rorteau, J, Chinoune, W, Ishiuchi, Y, Hughes, S, Gillet, B, Bechetoille, N, Sigaudo-Roussel, D, and Lamartine, J (2023).
Chronological aging impacts abundance, function and microRNA content of extracellular vesicles produced by human epidermal keratinocytes
Aging (Albany NY), 15(22):12702–12722.

Salamito, M, Gillet, B, Syx, D, Vaganay, E, Malbouyres, M, Cerutti, C, Tissot, N, Exbrayat-Héritier, C, Perez, P, Jones, C, Hughes, S, Malfait, F, Haydont, V, Jäger, S, and Ruggiero, F (2023).
NRF2 shortage in human skin fibroblasts dysregulates matrisome gene expression and affects collagen fibrillogenesis
J. Invest. Dermatol., 143(3):386–397.e12.

Cerutti, C, Zhang, L, Tribollet, V, Shi, JR, Brillet, R, Gillet, B, Hughes, S, Forcet, C, Shi, TL, and Vanacker, JM (2022).
Computational identification of new potential transcriptional partners of ERRα in breast cancer cells: specific partners for specific targets
Sci. Rep., 12(1):3826.

Ferrarini, MG, Dell'Aglio, E, Vallier, A, Balmand, S, Vincent-Monégat, C, Hughes, S, Gillet, B, Parisot, N, Zaidman-Rémy, A, Vieira, C, Heddi, A, and Rebollo, R (2022).
Efficient compartmentalization in insect bacteriomes protects symbiotic bacteria from host immune system
Microbiome, 10(1):156.

Sinigaglia, C, Almazán, A, Lebel, M, Sémon, M, Gillet, B, Hughes, S, Edsinger, E, Averof, M, and Paris, M (2022).
Distinct gene expression dynamics in developing and regenerating crustacean limbs
Proc. Natl. Acad. Sci. U. S. A., 119(27):e2119297119.

Jacob, H, Besson, M, Oberhaensli, F, Taylor, A, Gillet, B, Hughes, S, Melvin, SD, Bustamante, P, Swarzenski, PW, Lecchini, D, and Metian, M (2021).
A multifaceted assessment of the effects of polyethylene microplastics on juvenile gilthead seabreams (Sparus aurata)
Aquat Toxicol, 241:106004.

Parisot, N, Vargas-Chávez, C, Goubert, C, Baa-Puyoulet, P, Balmand, S, Beranger, L, Blanc, C, Bonnamour, A, Boulesteix, M, Burlet, N, Calevro, F, Callaerts, P, Chancy, T, Charles, H, Colella, S, Da Silva Barbosa, A, Dell'Aglio, E, Di Genova, A, Febvay, G, Gabaldón, T, Galvão Ferrarini, M, Gerber, A, Gillet, B, Hubley, R, Hughes, S, Jacquin-Joly, E, Maire, J, Marcet-Houben, M, Masson, F, Meslin, C, Montagné, N, Moya, A, Ribeiro de Vasconcelos, AT, Richard, G, Rosen, J, Sagot, MF, Smit, AFA, Storer, JM, Vincent-Monegat, C, Vallier, A, Vigneron, A, Zaidman-Rémy, A, Zamoum, W, Vieira, C, Rebollo, R, Latorre, A, and Heddi, A (2021).
The transposable element-rich genome of the cereal pest Sitophilus oryzae
BMC Biol., 19(1):241.

Parisot, N, Vargas-Chávez, C, Goubert, C, Baa-Puyoulet, P, Balmand, S, Beranger, L, Blanc, C, Bonnamour, A, Boulesteix, M, Burlet, N, Calevro, F, Callaerts, P, Chancy, T, Charles, H, Colella, S, Da Silva Barbosa, A, Dell'Aglio, E, Di Genova, A, Febvay, G, Gabaldón, T, Galvão Ferrarini, M, Gerber, A, Gillet, B, Hubley, R, Hughes, S, Jacquin-Joly, E, Maire, J, Marcet-Houben, M, Masson, F, Meslin, C, Montagné, N, Moya, A, Ribeiro de Vasconcelos, AT, Richard, G, Rosen, J, Sagot, MF, Smit, AFA, Storer, JM, Vincent-Monegat, C, Vallier, A, Vigneron, A, Zaidman-Rémy, A, Zamoum, W, Vieira, C, Rebollo, R, Latorre, A, and Heddi, A (2021).
The transposable element-rich genome of the cereal pest Sitophilus oryzae
BMC Biol, 19(1):241.

Girardot, F, Allégra, S, Pfendler, S, Conord, C, Rey, C, Gillet, B, Hughes, S, Bouchardon, AE, Hua, A, Paran, F, Bouchardon, JL, and Faure, O (2020).
Bacterial diversity on an abandoned, industrial wasteland contaminated by polychlorinated biphenyls, dioxins, furans and trace metals
Sci Total Environ, 748:141242.

Maire, J, Parisot, N, Galvao Ferrarini, M, Vallier, A, Gillet, B, Hughes, S, Balmand, S, Vincent-Monégat, C, Zaidman-Rémy, A, and Heddi, A (2020).
Spatial and morphological reorganization of endosymbiosis during metamorphosis accommodates adult metabolic requirements in a weevil
Proc Natl Acad Sci U S A, 117(32):19347–19358.

Benaoudia, S, Martin, A, Puig Gamez, M, Gay, G, Lagrange, B, Cornut, M, Krasnykov, K, Claude, JB, Bourgeois, CF, Hughes, S, Gillet, B, Allatif, O, Corbin, A, Ricci, R, and Henry, T (2019).
A genome-wide screen identifies IRF2 as a key regulator of caspase-4 in human cells
EMBO Rep, 20(9):e48235.

Nauroy, P, Guiraud, A, Chlasta, J, Malbouyres, M, Gillet, B, Hughes, S, Lambert, E, and Ruggiero, F (2019).
Gene profile of zebrafish fin regeneration offers clues to kinetics, organization and biomechanics of basement membrane
Matrix Biol, 75-76:82–101.

Gillet, B, Cottet, M, Destanque, T, Kue, K, Descloux, S, Chanudet, V, and Hughes, S (2018).
Direct fishing and eDNA metabarcoding for biomonitoring during a 3-year survey significantly improves number of fish detected around a South East Asian reservoir
PLoS One, 13(12):e0208592.

Martino, ME, Joncour, P, Leenay, R, Gervais, H, Shah, M, Hughes, S, Gillet, B, Beisel, C, and Leulier, F (2018).
Bacterial Adaptation to the Host's Diet Is a Key Evolutionary Force Shaping Drosophila-Lactobacillus Symbiosis
Cell Host Microbe, 24(1):109–119.

Nauroy, P, Hughes, S, Naba, A, and Ruggiero, F (2018).
The in-silico zebrafish matrisome: A new tool to study extracellular matrix gene and protein functions
Matrix Biol, 65:5–13.