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Bibliography

References to publications, sorted by year and author.

Karapidaki, I, Momose, T, Zilliox, M, and Averof, M (2024).
A toolkit for testing membrane localisation tags across species
bioRxiv.

Lanoizelet, M, Michel, L, Lagadec, R, Mayeur, H, Guichard, L, Logeux, V, Séverac, D, Martin, K, Klopp, C, Marcellini, S, Castillo, H, Pollet, N, Candal, E, Debiais-Thibaud, M, Boisvert, C, Billoud, B, Schubert, M, Blader, P, and Mazan, S (2024).
Analysis of a shark reveals ancient, Wnt-dependent, habenular asymmetries in vertebrates
Nat Commun, 15(1):10194.

Merabet, S and Carnesecchi, J (2024).
Hox dosage and morphological diversification during development and evolution
Semin Cell Dev Biol, 152-153:70-75.

Montanari, M, Manière, G, Berthelot-Grosjean, M, Dusabyinema, Y, Gillet, B, Grosjean, Y, Kurz, CL, and Royet, J (2024).
Larval microbiota primes the Drosophila adult gustatory response
Nat. Commun., 15(1):1341.

Nemoz-Billet, L, Balland, M, Gilquin, L, Gillet, B, vant, I, Guillon, E, Hughes, S, Carpentier, G, Vaganay, E, Sohm, F, Misiak, V, Gonzalez-Melo, MJ, Koch, M, Ghavi-Helm, Y, Bretaud, S, and Ruggiero, F (2024).
Dual topologies of myotomal collagen XV and Tenascin C act in concert to guide and shape developing motor axons
Proc Natl Acad Sci U S A, 121(13):e2314588121.

Poulsen, R, Zekri, Y, Guyot, R, Flamant, F, and Hansen, M (2024).
Effect of in utero and lactational exposure to a thyroid hormone system disrupting chemical on mouse metabolome and brain transcriptome
Environ. Pollut., 340(Pt 2):122783.

Rebollo, R, Gerenton, P, Cumunel, E, Mary, A, Sabot, F, Burlet, N, Gillet, B, Hughes, S, S. Oliveira, D, Goubert, C, Fablet, M, Vieira, C, and Lacroix, V (2024).
Identification and quantification of transposable element transcripts using Long-Read RNA-seq in Drosophila germline tissues
Peer Community J., 4(e89).

Sanchez-Garrido F, Bouzerand, B, Tesarova, M, Chaumeton, C, Fontaine, A, Zikmund, T, Kaiser, J, and Heude, E (2024).
Pleiotropic function of Dlx5/6 in coordinating the development of mammalian vocal and auditory organs
bioRxiv.

Tripathi, M, Gauthier, K, Sandireddy, R, Zhou, J, Guptta, P, Sakthivel, S, Teo, WW, Naing, YT, Arul, K, Tikno, K, Park, SH, Wu, Y, Wang, L, Bay, BH, Sun, L, Giguere, V, Chow, PKH, Ghosh, S, McDonnell, DP, Yen, PM, and Singh, BK (2024).
Esrra regulates Rplp1-mediated translation of lysosome proteins suppressed in metabolic dysfunction-associated steatohepatitis and reversed by alternate day fasting
Mol. Metab., 87(101997):101997.

Vanacker, J and Forcet, C (2024).
ERRα: unraveling its role as a key player in cell migration
Oncogene, 43(6):379-387.

Vanderperre, S and Merabet, S (2024).
Visualization of the Association of Dimeric Protein Complexes on Specific Enhancers in the Salivary Gland Nuclei of Drosophila Larva
Cells, 13(7):613.

Virard, F, Giraud, S, Bonnet, M, Magadoux, L, Martin, L, Pham, TH, Skafi, N, Deneuve, S, Frem, R, Villoutreix, BO, Sleiman, NH, Reboulet, J, Merabet, S, Chaptal, V, Chaveroux, C, Hussein, N, Aznar, N, Fenouil, T, Treilleux, I, Saintigny, P, Ansieau, S, Manié, S, Lebecque, S, Renno, T, and Coste, I (2024).
Targeting ERK-MYD88 interaction leads to ERK dysregulation and immunogenic cancer cell death
Nat Commun, 15(1):7037.

Zekri, Y, Poulsen, R, Hansen, M, Flamant, F, and Guyot, R (2024).
Combining transcriptomics and metabolomics to assess neurodevelopmental alteration caused by in utero exposure of mice to three putative thyroid hormone system disruptors
Toxicology, 508(153905):153905.

Çevrim, C, Laplace-Builhé, B, Sugawara, K, Lorenza Rusciano, M, Labert, N, Brocard, J, Almazán, A, and Averof, M (2024).
Long-term live imaging, cell identification and cell tracking in regenerating crustacean legs
bioRxiv.

Bouchet, M, Urdy, S, Guan, W, Kabir, C, Garvis, S, and Enriquez, J (2023).
A simple smiFISH pipeline to quantify mRNA at the single-cell level in 3D
STAR Protoc, 4(2):102316.

Cherrad, S, Gillet, B, Dellinger, J, Bellaton, L, Roux, P, Hernandez, C, Steva, H, Perrier, L, Vacher, S, and Hughes, S (2023).
New insights from short and long reads sequencing to explore cytochrome b variants in Plasmopara viticola populations collected from vineyards and related to resistance to complex III inhibitors
PLoS One, 18(1):e0268385.

Ferrarini, MG, Vallier, A, Vincent-Monégat, C, Dell'Aglio, E, Gillet, B, Hughes, S, Hurtado, O, Condemine, G, Zaidman-Rémy, A, Rebollo, R, Parisot, N, and Heddi, A (2023).
Coordination of host and endosymbiont gene expression governs endosymbiont growth and elimination in the cereal weevil Sitophilus spp
Microbiome, 11(1):274.

Grenier, T, Consuegra, J, Ferrarini, MG, Akherraz, H, Bai, L, Dusabyinema, Y, Rahioui, I, Da Silva, P, Gillet, B, Hughes, S, Ramos, CI, Matos, RC, and Leulier, F (2023).
Intestinal GCN2 controls Drosophila systemic growth in response to Lactiplantibacillus plantarum symbiotic cues encoded by r/tRNA operons
Elife, 12.

Idoux, R, ritier, C, Sohm, F, Jaque-Fernandez, F, Vaganay, E, Berthier, C, Bretaud, S, Jacquemond, V, Ruggiero, F, and Allard, B (2023).
A mechano- and heat-gated two-pore domain K+ channel controls excitability in adult zebrafish skeletal muscle
Proc Natl Acad Sci U S A, 120(45):e2305959120.

Jia, Y, Reboulet, J, Gillet, B, Hughes, S, Forcet, C, Tribollet, V, Hajj Sleiman, N, Kundlacz, C, Vanacker, JM, Bleicher, F, and Merabet, S (2023).
A live cell protein complementation assay for ORFeome-wide probing of human HOX interactomes
Cells, 12(1):200.

Joly, A and Leulier, F (2023).
[NOD2 signaling is at the interface between microbiota and linear growth in malnourished mice]
Med Sci (Paris), 39(10):712 - 715.

Khan, S, Pradhan, SJ, Giraud, G, Bleicher, F, Paul, R, Merabet, S, and Shashidhara, LS (2023).
A Micro-evolutionary Change in Target Binding Sites as a Key Determinant of Ultrabithorax Function in Drosophila
J Mol Evol.

Mauroux, A, Joncour, P, Brassard-Jollive, N, Bacar, H, Gillet, B, Hughes, S, Ardidie-Robouant, C, Marchand, L, Liabotis, A, Mailly, P, Monnot, C, Germain, S, Bordes, S, Closs, B, Ruggiero, F, and Muller, L (2023).
Papillary and reticular fibroblasts generate distinct microenvironments that differentially impact angiogenesis
Acta Biomater., 168:210–222.

Nedachi, T, Bonod, C, Rorteau, J, Chinoune, W, Ishiuchi, Y, Hughes, S, Gillet, B, Bechetoille, N, Sigaudo-Roussel, D, and Lamartine, J (2023).
Chronological aging impacts abundance, function and microRNA content of extracellular vesicles produced by human epidermal keratinocytes
Aging (Albany NY), 15(22):12702–12722.

Nemoz-Billet, L, Brocard, J, Ruggiero, F, and Bretaud, S (2023).
Quantitative Image Analysis of Axonal Morphology in In Vivo Model
Methods Protoc, 6(6):116.