publications-averof

This folder holds the following references to publications, sorted by year and author.

There are 50 references in this bibliography folder.

Almazán, A, Çevrim, C, Musser, JM, Averof, M, and Paris, M (2022).
Crustacean leg regeneration restores complex microanatomy and cell diversity
Sci Adv, 8(34):eabn9823.

Paris, M, Wolff, C, Patel, NH, and Averof, M (2022).
The crustacean model Parhyale hawaiensis
Curr Top Dev Biol, 147:199–230.

Sinigaglia, C, Almazán, A, Lebel, M, Sémon, M, Gillet, B, Hughes, S, Edsinger, E, Averof, M, and Paris, M (2022).
Distinct gene expression dynamics in developing and regenerating crustacean limbs
Proc Natl Acad Sci U S A, 119(27):e2119297119.

Sugawara, K, Çevrim, C, and Averof, M (2022).
Tracking cell lineages in 3D by incremental deep learning
Elife, 11:e69380.

Gilles, AF, Schinko, JB, Schacht, MI, Enjolras, C, and Averof, M (2019).
Clonal analysis by tunable CRISPR-mediated excision.
Development, 146(1).

Sinigaglia, C and Averof, M (2019).
The multifaceted role of nerves in animal regeneration
Current Opinion in Genetics & Development, 57:98-105.

Weigert, M, Schmidt, U, Haase, R, Sugawara, K, and Myers, G (2019).
Star-convex Polyhedra for 3D Object Detection and Segmentation in Microscopy
Miscellaneous publication.

Gilles, AF, Schinko, JB, Schacht, MI, Enjolras, C, and Averof, M (2018).
Clonal analysis by tunable CRISPR-mediated excision
Preprint.

Salvador-Martínez, I, Grillo, M, Averof, M, and Telford, MJ (2018).
Is it possible to reconstruct an accurate cell lineage using CRISPR recorders?
Preprint.

Shiga, Y, Kato, Y, Aragane-Nomura, Y, Haraguchi, T, Saridaki, T, Watanabe, H, Iguchi, T, Yamagata, H, and Averof, M (2017).
Repeated co-option of a conserved gene regulatory module underpins the evolution of the crustacean carapace, insect wings and other flat outgrowths
bioRxiv.

Alwes, F, Enjolras, C, and Averof, M (2016).
Live imaging reveals the progenitors and cell dynamics of limb regeneration.
Elife, 5.

Grillo, M, Konstantinides, N, and Averof, M (2016).
Old questions, new models: unraveling complex organ regeneration with new experimental approaches.
Curr Opin Genet Dev, 40:23-31.

Kao, D, Lai, AG, Stamataki, E, Rosic, S, Konstantinides, N, Jarvis, E, Di Donfrancesco, A, Pouchkina-Stancheva, N, Semon, M, Grillo, M, Bruce, H, Kumar, S, Siwanowicz, I, Le, A, Lemire, A, Eisen, MB, Extavour, C, Browne, WE, Wolff, C, Averof, M, Patel, NH, Sarkies, P, Pavlopoulos, A, and Aboobaker, A (2016).
The genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestion.
Elife, 5.

Gilles, AF, Schinko, JB, and Averof, M (2015).
Efficient CRISPR-mediated gene targeting and transgene replacement in the beetle Tribolium castaneum.
Development, 142(16):2832-9.

Gilles, AF and Averof, M (2014).
Functional genetics for all: engineered nucleases, CRISPR and the gene editing revolution.
Evodevo, 5:43.

Grillo, M, Casanova, J, and Averof, M (2014).
Development: a deep breath for endocrine organ evolution.
Curr Biol, 24(1):R38-40.

Konstantinides, N and Averof, M (2014).
A common cellular basis for muscle regeneration in arthropods and vertebrates.
Science, 343(6172):788-91.

Rodel, CJ, Gilles, AF, and Averof, M (2013).
MicroRNAs act as cofactors in bicoid-mediated translational repression.
Curr Biol, 23(16):1579-84.

El-Sherif, E, Averof, M, and Brown, SJ (2012).
A segmentation clock operating in blastoderm and germband stages of Tribolium development
Development, 139(23):4341-6.

Sarrazin, AF, Peel, AD, and Averof, M (2012).
A segmentation clock with two-segment periodicity in insects
Science, 336(6079):338-41.

Kontarakis, Z, Konstantinides, N, Pavlopoulos, A, and Averof, M (2011).
Reconfiguring gene traps for new tasks using iTRAC
Fly (Austin), 5(4):352-5.

Kontarakis, Z, Pavlopoulos, A, Kiupakis, A, Konstantinides, N, Douris, V, and Averof, M (2011).
A versatile strategy for gene trapping and trap conversion in emerging model organisms
Development, 138(12):2625-30.

Douris, V, Telford, MJ, and Averof, M (2010).
Evidence for multiple independent origins of trans-splicing in Metazoa
Mol Biol Evol, 27(3):684-93.

Lynch, JA, Peel, AD, Drechsler, A, Averof, M, and Roth, S (2010).
EGF signaling and the origin of axial polarity among the insects
Curr Biol, 20(11):1042-7.

Peel, AD and Averof, M (2010).
Early asymmetries in maternal transcript distribution associated with a cortical microtubule network and a polar body in the beetle Tribolium castaneum
Dev Dyn, 239(11):2875-87.