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Bibliography

References to publications, sorted by year and author.

Bancelin, S, Lynch, B, Bonod-Bidaud, C, Dokládal, P, Ruggiero, F, Allain, JM, and Schanne-Klein, MC (2019).
Combination of Traction Assays and Multiphoton Imaging to Quantify Skin Biomechanics
Methods Mol Biol, 1944:145–155.

Benaoudia, S, Martin, A, Puig Gamez, M, Gay, G, Lagrange, B, Cornut, M, Krasnykov, K, Claude, JB, Bourgeois, CF, Hughes, S, Gillet, B, Allatif, O, Corbin, A, Ricci, R, and Henry, T (2019).
A genome-wide screen identifies IRF2 as a key regulator of caspase-4 in human cells
EMBO Rep, 20(9):e48235.

Charrier, B, é, H, and Billoud, B (2019).
Gazing at Cell Wall Expansion under a Golden Light
Trends Plant Sci, 24(2):130–141.

Coudert, Y, Harris, S, and Charrier, B (2019).
Design Principles of Branching Morphogenesis in Filamentous Organisms
Curr Biol, 29(21):R1149-R1162.

da Costa, WKA, Brandão, LR, Martino, ME, Garcia, EF, Alves, AF, de Souza, EL, de Souza Aquino, J, Saarela, M, Leulier, F, Vidal, H, and Magnani, M (2019).
Qualification of tropical fruit-derived Lactobacillus plantarum strains as potential probiotics acting on blood glucose and total cholesterol levels in Wistar rats
Food Res Int, 124:109–117.

Dard, A, Jia, Y, Reboulet, J, Bleicher, F, Lavau, C, and Merabet, S (2019).
The human HOXA9 protein uses paralog-specific residues of the homeodomain to interact with TALE-class cofactors
Scientific Reports, 9(1):5664.

Dechaud, C, Volff, J, Schartl, M, and Naville, M (2019).
Sex and the TEs: transposable elements in sexual development and function in animals
Mobile DNA, 10(1):42.

Ducourthial, G, Affagard, J, Schmeltz, M, Solinas, X, Lopez-Poncelas, M, Bonod-Bidaud, C, Rubio-Amador, R, Ruggiero, F, Allain, J, Beaurepaire, E, and Schanne-Klein, M (2019).
Monitoring dynamic collagen reorganization during skin stretching with fast polarization-resolved SHG imaging
J Biophotonics(e201800336).

Furlan, S, Matos, RC, Kennedy, SP, Doublet, B, Serror, P, and Rigottier-Gois, L (2019).
Fitness Restoration of a Genetically Tractable Enterococcus faecalis V583 Derivative To Study Decoration-Related Phenotypes of the Enterococcal Polysaccharide Antigen
mSphere, 4(4).

Ghavi-Helm, Y (2019).
Functional consequences of chromosomal rearrangements on gene expression: not so deleterious after all?
Journal of Molecular Biology.

Ghavi-Helm, Y, Jankowski, A, Meiers, S, Viales, RR, Korbel, JO, and Furlong, EEM (2019).
Highly rearranged chromosomes reveal uncoupling between genome topology and gene expression
Nature Genetics.

Gilles, AF, Schinko, JB, Schacht, MI, Enjolras, C, and Averof, M (2019).
Clonal analysis by tunable CRISPR-mediated excision.
Development, 146(1).

Guenser, P, Souquet, L, Dolédec, S, Mazza, M, Rigo, M, and Goudemand, N (2019).
Deciphering the roles of environment and development in the evolution of a Late Triassic assemblage of conodont elements
Paleobiology:1–18.

Idoux, R, Bretaud, S, Berthier, C, Jacquemond, V, Ruggiero, F, and Allard, B (2019).
[Unraveling the pathophysiology of Bethlem Myopathy using a unique zebrafish model for the disease]
Med Sci (Paris), 35 Hors série n° 2:39–42.

Jattiot, R, Fara, E, Brayard, A, Urdy, S, and Goudemand, N (2019).
Learning from beautiful monsters: phylogenetic and morphogenetic implications of left-right asymmetry in ammonoid shells
BMC Evol Biol, 19(1):210.

Leenay, RT, Vento, JM, Shah, M, Martino, ME, Leulier, F, and Beisel, CL (2019).
Genome Editing with CRISPR-Cas9 in Lactobacillus plantarum Revealed That Editing Outcomes Can Vary Across Strains and Between Methods
Biotechnol J, 14(3):e1700583.

Ma, D and Leulier, F (2019).
A New Transkingdom Dimension to NO Signaling
Cell Metab, 29(3):513–515.

Ma, D, Bou-Sleiman, M, Joncour, P, Indelicato, CE, Frochaux, M, Braman, V, Litovchenko, M, Storelli, G, Deplancke, B, and Leulier, F (2019).
Commensal Gut Bacteria Buffer the Impact of Host Genetic Variants on Drosophila Developmental Traits under Nutritional Stress
iScience, 19:436–447.

Moretti, C, Stevant, I, and Ghavi-Helm, Y (2019).
3D genome organisation in Drosophila
Briefings in Functional Genomics.

Nauroy, P, Guiraud, A, Chlasta, J, Malbouyres, M, Gillet, B, Hughes, S, Lambert, E, and Ruggiero, F (2019).
Gene profile of zebrafish fin regeneration offers clues to kinetics, organization and biomechanics of basement membrane
Matrix Biol, 75-76:82–101.

Naville, M, Henriet, S, Warren, I, Sumic, S, Reeve, M, Volff, J, and Chourrout, D (2019).
Massive Changes of Genome Size Driven by Expansions of Non-autonomous Transposable Elements
Current Biology, 29(7):1161-1168.e6.

Ray, S, Rosenberg, MI, Chanut-Delalande, H, Decaras, A, Schwertner, B, Toubiana, W, Auman, T, Schnellhammer, I, Teuscher, M, Valenti, P, Khila, A, Klingler, M, and Payre, F (2019).
The mlpt/Ubr3/Svb module comprises an ancient developmental switch for embryonic patterning
Elife, 8.

Romero-Pozuelo, J, Foronda, D, Martin, P, Hudry, B, Merabet, S, Graba, Y, and Sanchez-Herrero, E (2019).
Cooperation of axial and sex specific information controls Drosophila female genitalia growth by regulating the Decapentaplegic pathway
Dev Biol.

Salis, P, Lorin, T, Lewis, V, Rey, C, Marcionetti, A, Escande, ML, Roux, N, Besseau, L, Salamin, N, Semon, M, Parichy, D, Volff, JN, and Laudet, V (2019).
Developmental and comparative transcriptomic identification of iridophore contribution to white barring in clownfish
Pigment Cell Melanoma Res.

Sinigaglia, C and Averof, M (2019).
The multifaceted role of nerves in animal regeneration
Current Opinion in Genetics & Development, 57:98-105.