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2022

CNN-based cell analysis: from image to quantitative representation

Author(s) : Allier C, Hervé L, Paviolo C, Mandula O, Cioni O, Pierré W, Andriani F, Padmanabhan K, Morales S,
Journal : Frontiers in Physics, Optics and Photonics
2022

The Clock Takes Shape—24 h Dynamics in Genome Topology

Author(s) : Tartour K, Padmanabhan K,
Journal : Frontiers in Cell and Developmental Biology
2022

Leg length and bristle density, both necessary for water surface locomotion, are genetically correlated in water striders

Author(s) : Finet C, Decaras A, Rutkowska M, Roux P, Collaudin S, Joncour P, Viala S, Khila A,
Journal : Proc Natl Acad Sci U S A
2022

Prenatal exposure to paraquat and nanoscaled TiO2 aerosols alters the gene expression of the developing brain

Author(s) : Hamdaoui Q, Zekri Y, Richard S, Aubert D, Guyot R, Markossian S, Gauthier K, Gaie-Levrel F, Bencsik A, Flamant F,
Journal : Chemosphere
2022

Tracking cell lineages in 3D by incremental deep learning

Author(s) : Sugawara K, Çevrim C, Averof M,
Journal : Elife
2022

DltC acts as an interaction hub for AcpS, DltA and DltB in the teichoic acid D-alanylation pathway of Lactiplantibacillus plantarum

Author(s) : Nikolopoulos N, Matos R, Courtin P, Ayala I, Akherraz H, Simorre J, Chapot-Chartier M, Leulier F, Ravaud S, Grangeasse C,
Journal : Sci Rep
2022

Approaches to discern if microbiome associations reflect causation in metabolic and immune disorders

Author(s) : Basic M, Dardevet D, Abuja P, Bolsega S, Bornes S, Caesar R, Calabrese F, Collino M, De Angelis M, rard P, Gueimonde M, Leulier F, Untersmayr E, Van Rymenant E, De Vos P, Savary-Auzeloux I,
Journal : Gut Microbes
2022

Genomics of the semi-aquatic bugs (Heteroptera; Gerromorpha): recent advances toward establishing a model lineage for the study of phenotypic evolution

Author(s) : Armisén D, Khila A,
Journal : Curr Opin Insect Sci
2022

Transcriptome-based Phylogeny of the Semi-aquatic Bugs (Hemiptera: Heteroptera: Gerromorpha) Reveals Patterns of Lineage Expansion in a Series of New Adaptive Zones

Author(s) : Armisén D, Viala S, Cordeiro I, Crumière A, Hendaoui E, Le Bouquin A, Duchemin W, Santos E, Toubiana W, Vargas-Lowman A, Burguez Floriano C, Polhemus D, Wang Y, Rowe L, Moreira F, Khila A,
Journal : Mol Biol Evol
2022

Hide and seek shark teeth in Random Forests: Machine learning applied to Scyliorhinus canicula

Author(s) : Berio F, Bayle Y, Baum D, Goudemand N, Debiais-Thibaud M,
Journal : PeerJ
2022

Temperature-driven heterochrony as a main evolutionary response to climate changes in conodonts

Author(s) : Souquet L, Guenser P, Girard C, Mazza M, Rigo M, Goudemand N,
Journal : Proc Biol Sci
2022

Mammalian PERIOD2 regulates H2A.Z incorporation in chromatin to orchestrate circadian negative feedback

Author(s) : Tartour K, Andriani F, Folco E, Letkova D, Schneider R, Saidi I, Sato T, Welz P, Benitah S, Allier C, Padmanabhan K,
Journal : Nat Struct Mol Biol
2022

Oppositional poly(A) tail length regulation by FMRP and CPEB1

Author(s) : Shin J, Paek K, Chikhaoui L, Jung S, Ponny S, Suzuki Y, Padmanabhan K, Richter J,
Journal : RNA
2022

The myotendinous junction marker collagen XXII enables zebrafish postural control learning and optimal swimming performance through its force transmission activity

Author(s) : Malbouyres M, Guiraud A, Lefrançois C, Salamito M, Nauroy P, Bernard L, Sohm F, Allard B, Ruggiero F,
Journal : Matrix Biol
2022

Post-transcriptional regulation of transcription factor codes in immature neurones drives neuronal diversity

Author(s) : Guan W, Bellemin S, Bouchet M, Venkatasubramanian L, Guillermin C, Laurençon A, Kabir C, Darnas A, Godin C, Urdy S, Mann R, Enriquez J,
Journal : Cell Reports
2022

Brown adipocytes local response to thyroid hormone is required for adaptive thermogenesis in adult male mice

Author(s) : Zekri Y, Guyot R, Suñer I, Canaple L, Stein A, Petit J, Aubert D, Richard S, Flamant F, Gauthier K,
Journal : Elife
2022

Functional definition of thyroid hormone response elements based on a synthetic STARR-seq screen

Author(s) : Flamant F, Zekri Y, Guyot R,
Journal : Endocrinology
2022

Integrating transcription and splicing into cell fate: Transcription factors on the block

Author(s) : Boumpas P, Merabet S, Carnesecchi J,
Journal : Wiley Interdiscip Rev RNA
2022

Crustacean leg regeneration restores complex microanatomy and cell diversity

Author(s) : Almazán A, Çevrim C, Musser J, Averof M, Paris M,
Journal : Sci Adv
2022

BTG1 inactivation drives lymphomagenesis and promotes lymphoma dissemination through activation of BCAR1

Author(s) : Delage L, Lambert M, Bardel E, Kundlacz C, Chartoire D, Conchon A, Peugnet A, Gorka L, Auberger P, Jacquel A, Soussain C, Destaing O, Delecluse H, Delecluse S, Merabet S, Traverse-Glehen A, Salles G, Bachy E, Billaud M, Ghesquieres H, Genestier L, Rouault J, Sujobert P,
Journal : Blood
2022

The crustacean model Parhyale hawaiensis

Author(s) : Paris M, Wolff C, Patel N, Averof M,
Journal : Curr Top Dev Biol
2022

Superfast excitation-contraction coupling in adult zebrafish skeletal muscle fibers

Author(s) : Idoux R, Bretaud S, Berthier C, Ruggiero F, Jacquemond V, Allard B,
Journal : J Gen Physiol
2022

Distinct gene expression dynamics in developing and regenerating crustacean limbs

Author(s) : Sinigaglia C, Almazán A, Lebel M, Sémon M, Gillet B, Hughes S, Edsinger E, Averof M, Paris M,
Journal : Proc Natl Acad Sci U S A
2022

A disease-associated mutation in thyroid hormone receptor α1 causes hearing loss and sensory hair cell patterning defects in mice

Author(s) : Affortit C, Blanc F, Nasr J, Ceccato J, Markossian S, Guyot R, Puel J, Flamant F, Wang J,
Journal : Sci Signal
2022

An Atlas of Thyroid Hormone Receptors' Target Genes in Mouse Tissues

Author(s) : Zekri Y, Guyot R, Flamant F,
Journal : Int J Mol Sci
2022

The neurodevelopmental gene MSANTD2 belongs to a gene family formed by recurrent molecular domestication of Harbinger transposons at the base of vertebrates

Author(s) : Etchegaray E, Baas D, Naville M, Haftek-Terreau Z, Volff J,
Journal : Mol Biol Evol
2022

ERRα coordinates actin and focal adhesion dynamics

Author(s) : Tribollet V, Cerutti C, Géloën A, Berger E, De Mets R, Balland M, Courchet J, Vanacker J, Forcet C,
Journal : Cancer Gene Ther
2022

Computational identification of new potential transcriptional partners of ERRα in breast cancer cells: specific partners for specific targets

Author(s) : Cerutti C, Zhang L, Tribollet V, Shi J, Brillet R, Gillet B, Hughes S, Forcet C, Shi T, Vanacker J,
Journal : Sci Rep
2022